New Core Marker Names for PhyloSift

Updated the PhyloSift Website to reflect the update to the Core markers (we’re now using Dongying’s newest set of 40 markers and have changed the reference marker names to reflect this.) The old table that was deleted is listed here – in case I need this HTML code in the future.

PhyloSift Marker

Gene Name

PMPROK00003 50S Ribosomal Protein L14P (rpl14P)
PMPROK00014 O-sialoglycoprotein endopeptidase (gcp)
PMPROK00015 30S Ribosomal Protein S3P (rps3P)
PMPROK00019 50S Ribosomal Protein S5 (rps5P)
PMPROK00020 50S Ribosomal Protein L6P (rpl6P)
PMPROK00022 50S Ribosomal Protein L1P (rpl1P)
PMPROK00024 50S Ribosomal Protein L22P (rpl22P)
PMPROK00025 30S Ribosomal Protein S19P (rps19P)
PMPROK00028 30S Ribosmal Protein S2P (rps2P)
PMPROK00029 50S Ribosomal Protein L11P (rpl11P)
PMPROK00031 GTP-binding signal recognition particle G-domain protein (srp54)
PMPROK00034 50S Ribosomal Protein L4P (rpl4P)
PMPROK00041 30S Ribsomal Protein S17P (rps17P)
PMPROK00047 CTP synthase, UTP-ammonia lyase (pyrG)
PMPROK00048 50S Ribosomal Protein L2P (rpl2P)
PMPROK00050 30S Ribosomal Protein S15P/S13e (rps15P)
PMPROK00051 30S Ribosomal Protein S9P/S13 (rps9P)
PMPROK00052 50S Ribsomal Protein L18P (rpl18P)
PMPROK00053 50S Ribosomal Protein L5P (rpl5P)
PMPROK00054 30S Ribosomal Protein S7P (rps7P)
PMPROK00060 Translation elongation factor aEF-2
PMPROK00064 Translation initiation factor aIF-2
PMPROK00067 50S Ribosomal Protein L24P (rpl24P)
PMPROK00068 30S Ribosomal Protein S11P (rps11P)
PMPROK00069 50S Ribosomal Protein L10E (rp10E)
PMPROK00071 50S Ribosomal Protein L16/L10E
PMPROK00074 30S Ribosomal Protein S8P (rps8E)
PMPROK00075 50S Ribosomal Protein L3P (rpl3P)
PMPROK00081 30S Ribosomal Protein S13P (rps13P)
PMPROK00086 Phenylalanyl-tRNA synthetase, beta subunit (pheT)
PMPROK00087 Phenylalanyl-tRNA synthetase, alpha subunit (pheS)
PMPROK00092 50S Ribosomal Protein L15P (rpl15P)
PMPROK00093 30S Ribosomal Protein S10P (rps10P)
PMPROK00094 30S Ribosomal Protein S12P (rps12P)
PMPROK00097 Triosephosphate isomerase (tpiA)
PMPROK00106 tRNA-ribosyltransferase / tRNA-guanine transglycosylase
PMPROK00123 rdgB/HAM1 protein family
PMPROK00126 Ribonuclease HII (rnhB)

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